ComplexDiff. An R-package to normalize and estimate differential DNA bindings of protein complexes with ChIP-seq data.
rnaseqcomp. An R/Bioconductor pakcage providing several quantitative and visualized benchmarks for RNA-seq quantification pipelines, accompanied with an easy-to-use web tool. Also available here on GitHub.
regSNPs. R code implementing the strategy for prioritizing regulatory single nucleotide substitutions.
Pre-SCNAClonal. Tumor subclonal population inferring tool.
FGB. A genome browser that provides comprehensive analysis and visualization for family genomes.
rHAT. A sequence alignment tool that provides fast alignment for noisy long reads with regional hashing.
PGB. A genome browser that provides comprehensive functional annotation and visualization for human individual genomes.
miR2Disease. A manually curated database for microRNA deregulation in human disease.